Principles of
Organization of the Multicellular Structure
It might be argued that if laws, rules, and genetic
information of unicellulars would have been sufficient for
the evolution of multicellularity, evolution of metazoan
life would not have taken more than 2 billion years, which
is longer than any other event in the evolution of life on
earth. Evolution of multicellularity required emergence of
new rules and principles of organization of cells in
supracellular structures. Unicellulars, by definition, did
not need such new rules and principles. For the evolution of
multicellular systems they were indispensable. Some of
these principles are self-evident. So, e.g. the development
and functioning of multicellular organisms requires
differentiation of phenotypically well-defined cell types
from cells that are genotypically identical. These cells
have to be spatially arranged in strictly determined
patterns from which various parts and organs of the
multicellular organism arise. Obviously, unicellulars did
not need to evolve this capability.
Focusing on metazoans, obviously erection of metazoan
structures requires huge amount of information for
specifying the spatial arrangement of the myriad of cells
they consist of. There is reason to believe that no
evolutionary pressure would arise for producing that kind of
information in unicellulars.
The metazoan organism has to coordinate the activity of
all of its cells and, based on this, perform the higher
functions at the organismic level. Obviously this
requirement does not apply to unicellulars, hence no
evolutionary pressure would arise for evolving mechanisms of
coordination of functions of cells in unicellulars.
Cell differentiation, generation of information for the
multicellular structure (as well as modes of its
transmission to the offspring), and the coordination of the
function of all the cells for generating functions at
the organismic level, are among the fundamental new
attributes that enabled evolution of metazoan life from
unicellular organisms.
The complexity arising from aggregation of cells in
multicellular structures and coordination of their function
unavoidably led to evolution of hierarchies of organization
in metazoans. The structural complexity and hierarchical
organization, naturally lead to functional compexity
(Valentine, 2003) to differentiation and specialization of
cells based on the division of labor between them.
The acquisition of the ability to generate information for
determining the spatial order of cells in the system
facilitated evolution in them of a new type of control
system, which is essential for any aggregation of cells that
has to rise to the level of a multicellular organism. As
argued in chapter 1, no metazoan organism would be able to
maintain its structure in absence of a control system. The
evolution of such a system that would make the
transformation of a colony of unicellulars into a primitive
metazoan and later into an eumetazoan organism possible took
almost 3 billion years, with the development of the neuron
and the nervous net, less than 600 million years ago.
Evolution of unicellular life is obviously depends on the
increase in the number and changes in the structure of their
genes: mycoplasmas, a group of simplest unicellular
organisms known so far, contain in their genome several
hundred genes, whereas the prokaryote Escherichia coli,
contains more than 4000 genes. A more complex unicellular
eukaryote, the protozoan Plasmodium falciparum, has
5300 genes but that number dramatically increased to 40,000
in an evolutionarily higher unicellular eukaryote,
Paramecium tetraurelia (Aury et al., 2006). The parallel
increase in the number of genes and the degree of functional
and structural complexity in the kingdom of unicellular
organisms suggests the existence of a causal relationship
between genes on the one hand, and the function and
morphology in evolution of unicellulars.
The unicellular principle of correlation between the number
of genes and degree of structural complexity is not valid
for metazoans. The early expectations of geneticists that
the number of genes in higher metazoans would be larger than
in lower metazoans did not prove to be true. Genome
sequencing of various metazoan organisms has shown that no
relationship between the number of genes or the size of the
genome and the complexity or the position of metazoans in
the tree of life exists. A human organism has about
20-25,000 genes in its genome (International Human Genome
Sequencing Consortium, 2004), i.e. only little more than,
the fruit fly (~20,000), a lower invertebrate organism but
less than a sheep or a chimpanzee and, even more
surprisingly, half of the genes of a unicellular eukaryote (Aury
et al., 2006).
This evidence leads to the question: if the degree of
metazoan structural and functional complexity, and the
evolutionary progress related to it, depends not on the
number of genes, what it may depend on?
Before entering into a discussion on this topic, it is
necessary to theoretically argue why the number of genes in
metazoans, contrary to what is observed in unicellulars, is
not related to the degree of their functional and structural
complexity. Why a correlation between evolution of genes and
structural complexity does not exist in metazoans?
One of the biggest challenges for the transition to the
multicellular organization is the coordination of the
activity cells that would enable the emergence and
maintenance of the multicellular system. Individual cells
would be instructed to relinquish their independent
existence, show some elementary “altruism” and subject their
existence to the need of maintaining the structure and
function of the multicellular system to which they belong.
Ultimately, their own life depends on, and is subordinate
to, the life of the multicellular system.
Thus, the emerging multicellular system was confronted with
another problem: generation and provision of information for
the functioning of the individual cells. Obviously, this
information is not in the genes inherited from their
unicellular ancestors, which could not predict that their
multicellular descendants some day would need some other
type of information. Metazoans, and multicellular organisms
in general, evolved from unicellulars, which clearly lack
any “coordinating genes” for they had no cells to
coordinate. Evolution does not work prophetically.
The ability of unicellulars to form colonies, loose
aggregates of relatively independent cells, seems to have
appeared as early as prokaryotes of the type of modern
bacteria, with considerable progress shown in the eukaryotic
colonies of the Volvox type. These aggregations are
qualitatively different from what is normally understood to
be an organism; the activity of the cells in the colony is
neither coordinated nor subordinate to the “demands of the
colony”.
Transition from those loose communities of cells (multicellular
colonies) to the more complex multicellular structure of
parazoans (porifera and parazoans) occurred no later than
600 million years ago.
Before the emergence of and eumetazoans, elements of the
coordination at the level of the multicellular system
evolved in Porifera. Moreover, non-genetic, epigenetic
control evolved early in unicellular eukaryotes (cortical
inheritance) as it will be shown later in this chapter.
Parazoans (Porifera and Placozoa) display a minimal degree
of coordination and cooperation at suborganismic levels and
a degree of structural integration at the level of organism,
which inspired some biologists to speak of the presence of a
still unidentified “neuroid” system in that group. They also
display a surprising degree of cellular differentiation,
which is comparable to that observed in lower eumetazoans (Cnidaria).
Axiomatically, it may be said that the development of
complex structures such as a metazoan organisms of this
primitive group from unicellular gametes, egg or zygote,
implies the presence of a developmental program at the
supracellular level, which is necessary not only for the
individual development from the unicellular stage to
adulthood but also for maintaining the unavoidably eroding
adult structure. What both the individual development of
the metazoan organism from a unicellular state to adult and
the maintenance of that structure, the homeostasis in the
broad meaning of the word, have in common is that both rely
on the presence of information for that normal adult
structure.
For reasons discussed earlier, this information is not in
genes (see chapter 1), for the only type of information
contained in genes are instructions for the primary protein
structure, i.e. for determining the sequence of amino acids
in the polypeptide chain. All the rest, the bulk of the
information for building metazoan structures is non- genetic
in origin.
A cell aggregation could behave as, and evolve into, a
multicellular organism only if it succeeds in meeting the
following minimal requirements:
1. Create a stable internal environment that would sustain
the life of all the cells throughout the multicellular
system.
2. “Memorize” its own supracellular structure and function
and, on this basis, set standards (set points) of the
parameters of its structure and functions.
3. Continually monitor the status of its structure and
function.
4. Process the input of information from the external and
internal environment for detecting deviations from the
normal structure and function and generate its output in the
form of signaling molecules that start signal cascades for
maintaining and restoring the unavoidably eroding structure
and functions of the organism.
5. Transmit to the germ cells its information on the
species-specific structure and function.
The above functions are essentially the functions of a
control system.
It seems that the first multicellular systems capable of
meeting all the above requirements and enter the path of the
evolutionary progress emerged some 550 to 540 million years
ago, during the Cambrian explosion. This seems to have
roughly coincided with the differentiation of the nerve
cell, the resulting nerve net, and the CNS (central nervous
system). At this juncture metazoans succeeded in evolving
the epigenetic system capable of generating and storing the
huge amounts of epigenetic information necessary for
erecting their extremely complex structure.
The ICS evolved out of the necessity to encode and remember
the extremely complex metazoan structure arising from the
precise spatial arrangement of billions to trillions of
cells of tens to hundreds of different types.
The CNS/neural net serves as controller of the integrated
system of control (ICS) in metazoans (see chapter 1).
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Unicellulars on the Verge
of Multicellularity
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Unicellular Antecedents
of Metazoan Life
From an evolutionary point of view, the emergence of
metazoans may be considered a natural result of the ~2.5
billion years evolution of unicellular life and accumulated
“evolutionary experience and wisdom”. In a specific meaning,
Protista was pregnant with multicellular life.
Primitive multicellulars used differentiated cells, instead
of molecules, as building blocks of their structures,
tissues and organs. Just as unicellulars use different
macromolecules in molding their organelles, multicellulars
use differentiated cells as building blocks for erecting
their structure and have to produce these building blocks
starting from a single initial cell (an egg cell or zygote)
Differentiated metazoan cells adopt different morphologies
and specialize to perform different physiological and
structural functions, despite the fact that they are
genetically identical. Division of labor between
differentiated cells in metazoans has its counterpart in a
“division of labor” at the molecular level in unicellulars.
Unicellular Premises of Coordination of Cell Activity in
Metazoans
If one would accept the prevailing idea that metazoans are
monophyletic, then the last common ancestor of Porifera and
eumetazoans, the Urmetazoa, has been in possession of
nearly all developmental gene families used by living
animals and that these families evolved before metazoan
cladogenesis. (Degnan, 2006)
A crucial condition for evolution of the metazoan structure
has been establishment in unicellulars of a link
between the extracellular stimuli with specific signal
transduction pathways, which in metazoans are related to the
cell differentiation, such as tyrosine kinase pathway, TGF-beta
and Wnt pathways. Some biologists believe that these
pathways could be activated by morphogen gradients (Degnan
et al., 2005) but this is very unlikely because such
gradients could not determine the intricate and convoluted
patterns of different cell types in developing metazoan
tissues and organs. The presence of signal transduction
pathways in the immediate ancestor of the Urmetazoan has
been an essential condition for the controlled expression of
transcription factors during embryogenesis that is observed
as early in the evolution of metazoan life as sponges are.
Although multicellularity evolved about one billion years
ago, sponges as first metazoans in paleontological record
are dated 580 million years ago, i.e. between 30 and 50
million years before the Cambrian explosion (Müller et al.,
2004). Among the metazoan-specific transcription factor
families expressed during sponge embryogenesis are members
of POU homeobox genes, LIM-HD, Pax, Bar, Prox2, NK-2, T-box,
MEF-2, Fox, Sox, and nuclear hormone receptor gene families
(Degnan et al., 2005).
Vast evidence shows that many of the genes that are
responsible for production of a number of vitally important
molecules in unicellulars are conserved in higher metazoans.
If metazoans evolved from unicellulars and if the Urmetazoan
had “master” control genes, it inherited them from its
unicellular ancestor. This is not just a speculation. All
Hox genes in metazoans and metaphyta share a
helix-loop-helix (HLH) and one or more modules
containing a 180 bp DNA segment, called homeobox. But
it is known that regulatory proteins in prokaryotes also
contain a similar 60 amino acids (what corresponds to 180 bp
in DNA) long helix-loop-helix that is found in all of their
repressor molecules. Similar sequences are contained in
yeast protein molecules MAT (mating type)-a1
and MAT- a2. It is noteworthy that switching
on/off of each of these genes determines the morphological
type of the yeast or mating type or both. In support of the
hypothesis that Hox genes evolved in protists before
the appearance of metazoans and metaphyta also comes from
the fact that both animals and plants share “master control
genes”, implying that their unicellular LCA (last common
ancestor) has been in possession of at least one Hox
gene.
It is assumed (based on the number of common Homeobox
genes in arthropods and mammals) that the Urmetazoan had 3-5
Hox genes in a single cluster. Later on, a
considerable expansion of these genes took place via gene
duplication. In sponges, the number of Hox genes
surprisingly decreased to 1 from a calculated 5-6 in the
Urmetazoan. In arthropods their number is 8, while in
mammals the Hox gene cluster has been repeatedly
duplicated to form four clusters, all slightly different,
with a total of 38 genes (Erwin et al., 1997).
Summarizing, we know that:
1. A unicellular homeobox domain is present in numerous
transcription factors in unicellulars,
2. Unicellulars are capable of developing different
morphological or mating types depending on whether one or
the other of two alternative homeodomain genes is expressed,
3. The Urmetazoan had no one or two Hox
genes but at least 5 of them (based on the number of
common homeobox genes found in extant animals and plants),
and
4. Metaphyta and Metazoa share common Hox
genes inherited from their common ancestor, which has
been a unicellular.
Hox genes evolved from one (or a few) primitive
Hox gene(s) that probably appeared in unicellulars ~1
billion year ago (Lappin et al., 2006). Evolving by gene
duplication, in most extant metazoans, Hox genes in
extant metazoans are found in gene clusters (figure 13.2).
Most of other gene families, and even gene regulatory
networks, are conserved across metazoan taxa with little
essential changes. Even species and higher taxa that are only
remotely related, use similar gene regulatory networks and the
same regulatory Hox genes for molding widely different
morphologies:
Thus, strikingly similar gene expression in embryos produces
strikingly dissimilar adults. This broad-scale evolutionary
dissociation between cause and effect is the Hox
Paradox (Wray 2002), so named because the Hox cluster has been
emblematic of the phenomenon of conserved developmental genes
and expression domains.
(Wray, 2003)
But paradoxes are expression of wrong views, illusions and
logical incongruities arising from fallacious understanding or
erroneous information on the phenomena under study. In dealing
with paradoxes it is always wiser to revise our ideas rather
than blame nature for creating them.
Recent studies have added new evidence that increase in the
number of genes has not been necessary and is not related to
the evolution of metazoans (figure 13.3). It
came as a great surprise the finding that the number of genes
in sponges, the oldest and lower standing phylum of the Animal
kingdom, a “dead end” of evolution, is 2-4 times greater than
the number of genes in higher animal groups, including us
humans (Müller et al., 2004).
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